Sequence analysis and molecular phylogeny of microorganisms (Prokaryotes, Fungi and microalgae)


  • Starting with raw files of sequence data and troubleshooting
  • Databases (genbank, Extaxon, Fusarium MLST, CBS, qbank)
  • Methods and tools in sequence analysis (Similarity search in BLAST, Phylogenic tree)
  • Sequence alignment methods and troubleshooting
  • Improving the sequence alignment using the CLC Main Workbench, MEGA, Bioedit, Geneious packages
  • Molecular identification and sequence analysis: Single gene vs multi gene sequence analysis
  • Methods in Bioinformatics applicable in identification and phylogenies
  • Professional skills in phylogenetic trees and troubleshooting of the phylogenies